What does high SWR mean? How big a difference is there between the two? With the amp on, what you're seeing at the radio is the SWR of the input circuit to the amp. If you tune the tuner for a good SWR with the amp on and it goes haywire when you turn the amp off, that
is something else. If you're going to use the amp, ignore the meter on the radio unless it's very high. As I recall, the input SWR on some bands on my SB200 was less than desirable.